File parallel_fasta_processor.cpp

↰ Parent directory (src/cpp)

Definition (src/cpp/parallel_fasta_processor.cpp)

• Program Listing for File parallel_fasta_processor.cpp

Includes

• atomic

• factorizer_core.hpp (File factorizer_core.hpp)

• factorizer_helpers.hpp (File factorizer_helpers.hpp)

• filesystem

• fstream

• mutex

• parallel_factorizer.hpp (File parallel_factorizer.hpp)

• parallel_fasta_processor.hpp (File parallel_fasta_processor.hpp)

• sdsl/construct.hpp

• sdsl/rmq_succinct_sct.hpp

• thread

• vector

Namespaces

• Namespace noLZSS

Functions

• Function noLZSS::parallel_write_factors_binary_file_fasta_dna_no_rc_per_sequence

• Function noLZSS::parallel_write_factors_binary_file_fasta_dna_w_rc_per_sequence

• Function noLZSS::parallel_write_factors_binary_file_fasta_multiple_dna_no_rc

• Function noLZSS::parallel_write_factors_binary_file_fasta_multiple_dna_w_rc

• Function noLZSS::parallel_write_factors_dna_w_reference_fasta_files_to_binary

• Function noLZSS::sanitize_filename

• Function noLZSS::write_fasta_metadata

• Function noLZSS::write_single_sequence_factors