File factorizer.cpp

↰ Parent directory (src/cpp)

Definition (src/cpp/factorizer.cpp)

• Program Listing for File factorizer.cpp

Includes

• cassert

• factorizer.hpp (File factorizer.hpp)

• fstream

• iostream

• limits

• optional

• sdsl/rmq_succinct_sct.hpp

• sdsl/suffix_trees.hpp

Namespaces

• Namespace noLZSS

Functions

• Function noLZSS::complement

• Function noLZSS::count_factors

• Function noLZSS::count_factors_dna_w_rc

• Function noLZSS::count_factors_file

• Function noLZSS::count_factors_file_dna_w_rc

• Function noLZSS::count_factors_file_multiple_dna_w_rc

• Function noLZSS::count_factors_multiple_dna_w_rc

• Function noLZSS::factorize

• Function noLZSS::factorize_dna_w_rc

• Function noLZSS::factorize_file

• Function noLZSS::factorize_file_dna_w_rc

• Function noLZSS::factorize_file_multiple_dna_w_rc

• Template Function noLZSS::factorize_file_stream

• Template Function noLZSS::factorize_file_stream_dna_w_rc

• Template Function noLZSS::factorize_file_stream_multiple_dna_w_rc

• Function noLZSS::factorize_multiple_dna_w_rc

• Template Function noLZSS::factorize_stream

• Template Function noLZSS::factorize_stream_dna_w_rc

• Template Function noLZSS::factorize_stream_multiple_dna_w_rc

• Function noLZSS::lcp

• Function noLZSS::next_leaf

• Template Function noLZSS::nolzss

• Template Function noLZSS::nolzss_dna_w_rc

• Template Function noLZSS::nolzss_multiple_dna_w_rc

• Function noLZSS::prepare_multiple_dna_sequences_no_rc

• Function noLZSS::prepare_multiple_dna_sequences_w_rc

• Function noLZSS::revcomp

• Function noLZSS::write_factors_binary_file

• Function noLZSS::write_factors_binary_file_dna_w_rc

• Function noLZSS::write_factors_binary_file_multiple_dna_w_rc

Typedefs

• Typedef noLZSS::cst_t